@@ -46,7 +46,7 @@ RUN conda config --add channels conda-forge && \
4646
4747# The anaconda base image includes outdated versions of these packages. Update them to include the latest version.
4848RUN pip install seaborn python-dateutil dask && \
49- pip install pyyaml joblib pytagcloud husl geopy ml_metrics mne pyshp && \
49+ pip install pyyaml joblib husl geopy ml_metrics mne pyshp && \
5050 pip install pandas && \
5151 # Install h2o from source.
5252 # Use `conda install -c h2oai h2o` once Python 3.7 version is released to conda.
@@ -80,21 +80,12 @@ RUN apt-get install -y libfreetype6-dev && \
8080 pip install xgboost && \
8181 # Pinned to match GPU version. Update version together.
8282 pip install lightgbm==2.3.1 && \
83- pip install git+git://github.com/Lasagne/Lasagne.git && \
8483 pip install keras && \
8584 pip install keras-tuner && \
8685 pip install flake8 && \
87- # neon
88- cd /usr/local/src && \
89- git clone --depth 1 https://github.com/NervanaSystems/neon.git && \
90- cd neon && pip install . && \
91- # nolearn
92- pip install nolearn && \
9386 pip install Theano && \
94- pip install pybrain && \
9587 pip install python-Levenshtein && \
9688 pip install hep_ml && \
97- # chainer
9889 pip install chainer && \
9990 # NLTK Project datasets
10091 mkdir -p /usr/share/nltk_data && \
@@ -135,10 +126,6 @@ RUN pip install scipy && \
135126 # PUDB, for local debugging convenience
136127 pip install pudb && \
137128 pip install imbalanced-learn && \
138- # Convex Optimization library
139- # Latest version fails to install, see https://github.com/cvxopt/cvxopt/issues/77
140- # and https://github.com/cvxopt/cvxopt/issues/80
141- # pip install cvxopt && \
142129 # Profiling and other utilities
143130 pip install line_profiler && \
144131 pip install orderedmultidict && \
@@ -164,7 +151,6 @@ RUN apt-get install -y libgl1-mesa-glx && \
164151 /tmp/clean-layer.sh
165152
166153RUN pip install mpld3 && \
167- pip install mplleaflet && \
168154 pip install gpxpy && \
169155 pip install arrow && \
170156 pip install nilearn && \
@@ -173,7 +159,6 @@ RUN pip install mpld3 && \
173159 pip install markovify && \
174160 pip install imgaug && \
175161 pip install preprocessing && \
176- pip install Baker && \
177162 pip install path.py && \
178163 pip install Geohash && \
179164 # https://github.com/vinsci/geohash/issues/4
@@ -183,15 +168,13 @@ RUN pip install mpld3 && \
183168 pip install scikit-optimize && \
184169 pip install haversine && \
185170 pip install toolz cytoolz && \
186- pip install sacred && \
187171 pip install plotly && \
188172 pip install hyperopt && \
189173 pip install fitter && \
190174 pip install langid && \
191175 # Delorean. Useful for dealing with datetime
192176 pip install delorean && \
193177 pip install trueskill && \
194- pip install heamy && \
195178 # Useful data exploration libraries (for missing data and generating reports)
196179 pip install missingno && \
197180 pip install pandas-profiling && \
@@ -212,7 +195,6 @@ RUN pip install mpld3 && \
212195 pip install spectral && \
213196 pip install descartes && \
214197 pip install geojson && \
215- pip install terminalplot && \
216198 pip install pydicom && \
217199 pip install wavio && \
218200 pip install SimpleITK && \
@@ -231,14 +213,11 @@ RUN pip install mpld3 && \
231213 pip install geoviews && \
232214 pip install hypertools && \
233215 pip install py_stringsimjoin && \
234- pip install nibabel && \
235216 pip install mlens && \
236217 pip install scikit-multilearn && \
237218 pip install cleverhans && \
238219 pip install leven && \
239220 pip install catboost && \
240- # fastFM doesn't support Python 3.7 yet: https://github.com/ibayer/fastFM/issues/151
241- # pip install fastFM && \
242221 pip install lightfm && \
243222 pip install folium && \
244223 pip install scikit-plot && \
@@ -254,12 +233,12 @@ RUN pip install mpld3 && \
254233 pip install kaggle && \
255234 /tmp/clean-layer.sh
256235
257- RUN pip install kmeans-smote --no-dependencies && \
236+ RUN pip install tensorpack && \
258237 # Add google PAIR-code Facets
259238 cd /opt/ && git clone https://github.com/PAIR-code/facets && cd facets/ && jupyter nbextension install facets-dist/ --user && \
260239 export PYTHONPATH=$PYTHONPATH:/opt/facets/facets_overview/python/ && \
261- pip install tensorpack && \
262- pip install pycountry && pip install iso3166 && \
240+ pip install pycountry && \
241+ pip install iso3166 && \
263242 pip install pydash && \
264243 pip install kmodes --no-dependencies && \
265244 pip install librosa && \
@@ -296,23 +275,18 @@ RUN pip install --upgrade cython && \
296275 # Pandas data reader
297276 pip install pandas-datareader && \
298277 pip install wordsegment && \
299- pip install pyahocorasick && \
300278 pip install wordbatch && \
301279 pip install emoji && \
302280 # Add Japanese morphological analysis engine
303281 pip install janome && \
304282 pip install wfdb && \
305283 pip install vecstack && \
306- # Doesn't support Python 3.7 yet. Last release on pypi is from 2017.
307- # Add back once this PR is released: https://github.com/scikit-learn-contrib/lightning/pull/133
308- # pip install sklearn-contrib-lightning && \
309284 # yellowbrick machine learning visualization library
310285 pip install yellowbrick && \
311286 pip install mlcrate && \
312287 /tmp/clean-layer.sh
313288
314- RUN pip install bcolz && \
315- pip install bleach && \
289+ RUN pip install bleach && \
316290 pip install certifi && \
317291 pip install cycler && \
318292 pip install decorator && \
@@ -398,7 +372,6 @@ RUN pip install flashtext && \
398372 # b/167220714 unpin once matplotlib >= 3.3 is installed in the base image.
399373 pip install tensorforce==0.5.5 && \
400374 pip install pyarabic && \
401- pip install conx && \
402375 pip install pandasql && \
403376 pip install tensorflow_hub && \
404377 pip install jieba && \
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