chore(deps): Bump the noodles group with 4 updates #20
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Bumps the noodles group with 4 updates: [noodles-bgzf](https://github.com/zaeleus/noodles), [noodles-bam](https://github.com/zaeleus/noodles), [noodles-bed](https://github.com/zaeleus/noodles) and [noodles-fastq](https://github.com/zaeleus/noodles). Updates `noodles-bgzf` from 0.36.0 to 0.42.0 - [Commits](zaeleus/noodles@noodles-bgzf-0.36.0...noodles-bgzf-0.42.0) Updates `noodles-bam` from 0.81.0 to 0.83.0 - [Commits](zaeleus/noodles@noodles-bam-0.81.0...noodles-bam-0.83.0) Updates `noodles-bed` from 0.26.0 to 0.28.0 - [Commits](zaeleus/noodles@noodles-bed-0.26.0...noodles-bed-0.28.0) Updates `noodles-fastq` from 0.19.0 to 0.21.0 - [Commits](zaeleus/noodles@noodles-fastq-0.19.0...noodles-fastq-0.21.0) --- updated-dependencies: - dependency-name: noodles-bgzf dependency-version: 0.42.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-bam dependency-version: 0.83.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-bed dependency-version: 0.28.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-fastq dependency-version: 0.21.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles ... Signed-off-by: dependabot[bot] <support@github.com>
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Bumps the noodles group with 4 updates: noodles-bgzf, noodles-bam, noodles-bed and noodles-fastq.
Updates
noodles-bgzffrom 0.36.0 to 0.42.0Commits
30f24adBump versions for noodles 0.100.00641ee0cram/io/reader/header/container/block: Use content type decoderb6a2341cram/io/reader/header/container/block: Use compression method decoder645486fcram/io/reader/header/container/block: Use u8 reader52ad0f7cram/io/reader/num: Add little-endian u32 readerdbc5591cram/io/reader/num: Add little-endian i32 reader2a752e4cram/io/reader/num/vlq: Use u8 reader7378268cram/io/reader/query: Extract filter162915abcf: Move MAGIC_NUMBER to io module10f60b7bam/examples/split: Use bstr formatterUpdates
noodles-bamfrom 0.81.0 to 0.83.0Commits
cd83ea1Bump versions for noodles 0.101.03d3b9dftabix/io/reader/index/reference_sequences/intervals: Collect intervals045f678bam/bai/io/reader/index/reference_sequences/intervals: Collect intervals0cdefdfbgzf/fs: Deprecate open function711b3e8sam/io/writer/record/cigar/op/kind: Extract encoderd224da0sam/io/writer/record/cigar: Move op writer to a module9d6ccd7vcf/io/writer/record/samples/sample/value/array: Constrain integer values6444fe0vcf/io/writer/record/samples/sample/value: Add float writer0a15be7vcf/io/writer/record/samples/sample/value/array: Extract separator writer76b742fvcf/io/writer/record/info/field/value/array: Constrain integer valuesUpdates
noodles-bedfrom 0.26.0 to 0.28.0Commits
cd83ea1Bump versions for noodles 0.101.03d3b9dftabix/io/reader/index/reference_sequences/intervals: Collect intervals045f678bam/bai/io/reader/index/reference_sequences/intervals: Collect intervals0cdefdfbgzf/fs: Deprecate open function711b3e8sam/io/writer/record/cigar/op/kind: Extract encoderd224da0sam/io/writer/record/cigar: Move op writer to a module9d6ccd7vcf/io/writer/record/samples/sample/value/array: Constrain integer values6444fe0vcf/io/writer/record/samples/sample/value: Add float writer0a15be7vcf/io/writer/record/samples/sample/value/array: Extract separator writer76b742fvcf/io/writer/record/info/field/value/array: Constrain integer valuesUpdates
noodles-fastqfrom 0.19.0 to 0.21.0Commits
cd83ea1Bump versions for noodles 0.101.03d3b9dftabix/io/reader/index/reference_sequences/intervals: Collect intervals045f678bam/bai/io/reader/index/reference_sequences/intervals: Collect intervals0cdefdfbgzf/fs: Deprecate open function711b3e8sam/io/writer/record/cigar/op/kind: Extract encoderd224da0sam/io/writer/record/cigar: Move op writer to a module9d6ccd7vcf/io/writer/record/samples/sample/value/array: Constrain integer values6444fe0vcf/io/writer/record/samples/sample/value: Add float writer0a15be7vcf/io/writer/record/samples/sample/value/array: Extract separator writer76b742fvcf/io/writer/record/info/field/value/array: Constrain integer valuesDependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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